Ugly Alpha 1
hts-sys:2.0.2

total uncompressed bytes

13.1 MB

total files

657

Fix

NewInclude { include: [ "src/lib.rs", "README.md", "CHANGELOG.md", "htslib/*", "build.rs", "!**/test/**/*", "!**/*_test.*", "!**/tests/**/*", ], has_build_script: true, }

471 wasted files

total waste: 10.0 MB

  1. htslib/test/ce#large_seq.sam : 2.1 MB
  2. htslib/test/ce.fa : 1.1 MB
  3. htslib/test/xx#large_aux.sam : 905.5 KB
  4. osx_prebuilt_bindings.rs : 573.7 KB
  5. linux_prebuilt_bindings.rs : 336.6 KB
  6. htslib/test/ce#1000.sam : 322.6 KB
  7. htslib/htscodecs/tests/dat/q4 : 152.0 KB
  8. htslib/htscodecs/tests/dat/q8 : 147.4 KB
  9. htslib/htscodecs/tests/dat/q40+dir : 103.0 KB
  10. htslib/htscodecs/tests/names/08.names : 86.1 KB
  11. htslib/test/sam.c : 78.9 KB
  12. htslib/htscodecs/tests/names/03.names : 77.4 KB
  13. htslib/test/index.vcf : 68.9 KB
  14. htslib/htscodecs/tests/dat/qvar : 62.4 KB
  15. htslib/test/index_dos.sam : 54.4 KB
  16. htslib/test/index.sam : 54.2 KB
  17. htslib/htscodecs/tests/dat/arith/q40+dir.64 : 51.2 KB
  18. htslib/htscodecs/tests/dat/r4x8/q40+dir.1 : 50.5 KB
  19. htslib/htscodecs/tests/dat/r4x8/q40+dir.0 : 50.3 KB
  20. htslib/htscodecs/tests/dat/r4x16/q40+dir.0 : 50.2 KB
  21. htslib/htscodecs/tests/dat/r4x16/q40+dir.9 : 50.1 KB
  22. htslib/htscodecs/tests/dat/r4x16/q40+dir.8 : 50.1 KB
  23. htslib/htscodecs/tests/dat/arith/q40+dir.0 : 49.9 KB
  24. htslib/htscodecs/tests/dat/arith/q40+dir.8 : 49.8 KB
  25. htslib/htscodecs/tests/dat/r4x16/q40+dir.1 : 49.4 KB
  26. htslib/htscodecs/tests/dat/arith/q40+dir.9 : 49.4 KB
  27. htslib/htscodecs/tests/dat/arith/q40+dir.65 : 49.1 KB
  28. htslib/htscodecs/tests/dat/arith/q40+dir.1 : 49.0 KB
  29. htslib/test/fastqs.fq : 48.6 KB
  30. htslib/htscodecs/tests/dat/fqzcomp/q40+dir.3 : 48.5 KB
  31. htslib/htscodecs/tests/dat/fqzcomp/q40+dir.0 : 47.7 KB
  32. htslib/htscodecs/tests/dat/fqzcomp/q40+dir.2 : 47.2 KB
  33. htslib/htscodecs/tests/names/01.names : 45.9 KB
  34. htslib/htscodecs/tests/dat/fqzcomp/q40+dir.1 : 43.8 KB
  35. htslib/htscodecs/tests/names/02.names : 41.1 KB
  36. htslib/test/test.pl : 40.0 KB
  37. htslib/htscodecs/tests/names/nv.names : 39.5 KB
  38. htslib/htscodecs/tests/names/nv2.names : 38.5 KB
  39. htslib/htscodecs/tests/names/10.names : 38.2 KB
  40. htslib/htscodecs/tests/names/rr.names : 36.9 KB
  41. htslib/htscodecs/tests/dat/arith/q8.64 : 35.2 KB
  42. htslib/htscodecs/tests/dat/fqzcomp/qvar.1 : 35.0 KB
  43. htslib/htscodecs/tests/dat/fqzcomp/q8.1 : 33.7 KB
  44. htslib/htscodecs/tests/dat/r4x16/q8.64 : 33.5 KB
  45. htslib/htscodecs/tests/dat/arith/qvar.64 : 33.2 KB
  46. htslib/htscodecs/tests/dat/r4x8/q8.0 : 33.1 KB
  47. htslib/htscodecs/tests/dat/r4x16/q8.0 : 33.1 KB
  48. htslib/htscodecs/tests/dat/r4x8/qvar.0 : 33.0 KB
  49. htslib/htscodecs/tests/dat/r4x16/qvar.0 : 33.0 KB
  50. htslib/htscodecs/tests/names/20.names : 32.9 KB
  51. htslib/htscodecs/tests/dat/fqzcomp/qvar.0 : 32.9 KB
  52. htslib/htscodecs/tests/dat/r4x8/qvar.1 : 32.8 KB
  53. htslib/htscodecs/tests/dat/arith/q8.0 : 32.8 KB
  54. htslib/htscodecs/tests/dat/arith/qvar.0 : 32.6 KB
  55. htslib/htscodecs/tests/names/05.names : 32.5 KB
  56. htslib/htscodecs/tests/dat/fqzcomp/qvar.2 : 32.4 KB
  57. htslib/htscodecs/tests/dat/arith/q8.192 : 32.3 KB
  58. htslib/htscodecs/tests/dat/r4x16/qvar.1 : 32.3 KB
  59. htslib/htscodecs/tests/dat/r4x16/q8.128 : 32.2 KB
  60. htslib/htscodecs/tests/dat/fqzcomp/qvar.3 : 32.1 KB
  61. htslib/htscodecs/tests/dat/arith/q8.128 : 32.1 KB
  62. htslib/htscodecs/tests/dat/r4x16/q8.192 : 32.0 KB
  63. htslib/htscodecs/tests/dat/arith/qvar.65 : 32.0 KB
  64. htslib/htscodecs/tests/dat/arith/qvar.1 : 32.0 KB
  65. htslib/test/longrefs/longref.sam : 31.7 KB
  66. htslib/htscodecs/tests/dat/fqzcomp/q8.3 : 31.7 KB
  67. htslib/test/test_bgzf.c : 31.6 KB
  68. htslib/htscodecs/tests/dat/r4x8/q8.1 : 31.4 KB
  69. htslib/htscodecs/tests/dat/r4x16/q8.1 : 31.4 KB
  70. htslib/htscodecs/tests/dat/arith/q8.1 : 31.3 KB
  71. htslib/htscodecs/tests/dat/r4x16/q8.129 : 31.3 KB
  72. htslib/htscodecs/tests/dat/r4x16/q8.193 : 31.1 KB
  73. htslib/htscodecs/tests/dat/arith/q8.129 : 31.1 KB
  74. htslib/htscodecs/tests/dat/r4x16/q8.65 : 31.0 KB
  75. htslib/htscodecs/tests/dat/fqzcomp/q8.2 : 31.0 KB
  76. htslib/htscodecs/tests/dat/arith/q8.193 : 30.9 KB
  77. htslib/htscodecs/tests/dat/arith/q8.65 : 30.9 KB
  78. htslib/htscodecs/tests/dat/fqzcomp/q8.0 : 30.0 KB
  79. htslib/test/test-vcf-api.c : 23.9 KB
  80. htslib/test/xx#large_aux_java.cram : 22.7 KB
  81. htslib/test/longrefs/index.vcf : 21.5 KB
  82. htslib/test/test-bcf-sr.pl : 19.6 KB
  83. htslib/htscodecs/tests/names/09.names : 18.0 KB
  84. htslib/test/hts_endian.c : 17.6 KB
  85. htslib/test/test-regidx.c : 16.9 KB
  86. htslib/test/longrefs/longref_multi.expected.sam : 15.0 KB
  87. htslib/test/test_view.c : 14.8 KB
  88. htslib/htscodecs/tests/dat/arith/q4.64 : 13.4 KB
  89. htslib/test/range.bam : 13.3 KB
  90. htslib/htscodecs/tests/dat/r4x16/q4.64 : 12.9 KB
  91. htslib/htscodecs/tests/fqzcomp_qual_test.c : 12.1 KB
  92. htslib/test/test_kstring.c : 12.1 KB
  93. htslib/test/hfile.c : 12.0 KB
  94. htslib/htscodecs/tests/dat/r4x16/q4.8 : 11.7 KB
  95. htslib/htscodecs/tests/dat/r4x8/q4.0 : 11.7 KB
  96. htslib/htscodecs/tests/dat/r4x16/q4.0 : 11.7 KB
  97. htslib/htscodecs/tests/dat/arith/q4.0 : 11.6 KB
  98. htslib/htscodecs/tests/dat/arith/q4.8 : 11.4 KB
  99. htslib/htscodecs/tests/names/tok3/03.names.1 : 11.2 KB
  100. htslib/htscodecs/tests/dat/r4x16/q4.192 : 11.2 KB
  101. htslib/test/range.cram : 11.2 KB
  102. htslib/htscodecs/tests/dat/r4x16/q4.9 : 11.1 KB
  103. htslib/htscodecs/tests/dat/arith/q4.192 : 11.1 KB
  104. htslib/htscodecs/tests/dat/arith/q4.9 : 11.1 KB
  105. htslib/htscodecs/tests/dat/r4x16/q4.128 : 10.9 KB
  106. htslib/htscodecs/tests/dat/r4x16/q4.129 : 10.9 KB
  107. htslib/htscodecs/tests/dat/r4x8/q4.1 : 10.9 KB
  108. htslib/htscodecs/tests/dat/r4x16/q4.1 : 10.8 KB
  109. htslib/htscodecs/tests/dat/arith/q4.1 : 10.8 KB
  110. htslib/htscodecs/tests/dat/r4x16/q4.193 : 10.8 KB
  111. htslib/htscodecs/tests/dat/arith/q4.128 : 10.8 KB
  112. htslib/htscodecs/tests/dat/r4x16/q4.65 : 10.7 KB
  113. htslib/htscodecs/tests/dat/arith/q4.65 : 10.5 KB
  114. htslib/htscodecs/tests/dat/fqzcomp/q4.3 : 10.5 KB
  115. htslib/htscodecs/tests/dat/arith/q4.129 : 10.3 KB
  116. htslib/htscodecs/tests/dat/arith/q4.193 : 10.3 KB
  117. htslib/htscodecs/tests/varint_test.c : 10.2 KB
  118. htslib/htscodecs/tests/names/tok3/03.names.11 : 9.8 KB
  119. htslib/htscodecs/tests/dat/fqzcomp/q4.1 : 9.6 KB
  120. htslib/htscodecs/tests/dat/fqzcomp/q4.2 : 9.5 KB
  121. htslib/htscodecs/tests/dat/fqzcomp/q4.0 : 9.3 KB
  122. htslib/htscodecs/tests/names/tok3/rr.names.1 : 9.0 KB
  123. htslib/test/test-bcf-translate.c : 9.0 KB
  124. htslib/test/test_str2int.c : 8.9 KB
  125. htslib/htscodecs/tests/names/tok3/rr.names.11 : 8.5 KB
  126. htslib/test/longrefs/longref_itr.expected.sam : 8.3 KB
  127. htslib/htscodecs/tests/names/tok3/03.names.5 : 7.8 KB
  128. htslib/htscodecs/tests/names/tok3/03.names.3 : 7.8 KB
  129. htslib/htscodecs/tests/rANS_static4x16pr_test.c : 7.8 KB
  130. htslib/htscodecs/tests/names/tok3/03.names.9 : 7.5 KB
  131. htslib/htscodecs/tests/names/tok3/03.names.7 : 7.5 KB
  132. htslib/htscodecs/tests/arith_dynamic_test.c : 7.4 KB
  133. htslib/htscodecs/tests/names/tok3/08.names.1 : 7.3 KB
  134. htslib/htscodecs/tests/rANS_static_test.c : 7.3 KB
  135. htslib/htscodecs/tests/names/tok3/03.names.13 : 7.3 KB
  136. htslib/htscodecs/tests/names/tok3/03.names.15 : 7.3 KB
  137. htslib/htscodecs/tests/names/tok3/nv.names.1 : 7.2 KB
  138. htslib/htscodecs/tests/names/tok3/03.names.17 : 7.1 KB
  139. htslib/htscodecs/tests/names/tok3/03.names.19 : 7.1 KB
  140. htslib/test/test-parse-reg.c : 7.1 KB
  141. htslib/htscodecs/tests/names/tok3/02.names.1 : 7.0 KB
  142. htslib/test/pileup.c : 7.0 KB
  143. htslib/test/test_expr.c : 7.0 KB
  144. htslib/htscodecs/tests/names/tok3/10.names.1 : 6.9 KB
  145. htslib/htscodecs/tests/names/tok3/08.names.11 : 6.8 KB
  146. htslib/test/ce#5b_java.cram : 6.8 KB
  147. htslib/test/compare_sam.pl : 6.5 KB
  148. htslib/htscodecs/tests/names/tok3/02.names.11 : 6.5 KB
  149. htslib/htscodecs/tests/names/tok3/nv.names.11 : 6.4 KB
  150. htslib/htscodecs/tests/names/tok3/rr.names.3 : 6.3 KB
  151. htslib/htscodecs/tests/names/tok3/rr.names.5 : 6.3 KB
  152. htslib/htscodecs/tests/names/tok3/rr.names.9 : 6.2 KB
  153. htslib/htscodecs/tests/names/tok3/rr.names.7 : 6.2 KB
  154. htslib/htscodecs/tests/names/tok3/10.names.11 : 6.2 KB
  155. htslib/htscodecs/tests/names/tok3/rr.names.13 : 6.1 KB
  156. htslib/htscodecs/tests/names/tok3/rr.names.15 : 6.0 KB
  157. htslib/htscodecs/tests/names/tok3/rr.names.19 : 6.0 KB
  158. htslib/htscodecs/tests/names/tok3/rr.names.17 : 6.0 KB
  159. htslib/test/tabix/gff_file.gff : 5.6 KB
  160. htslib/test/simple_test_driver.sh : 5.6 KB
  161. htslib/htscodecs/tests/tokenise_name3_test.c : 5.5 KB
  162. htslib/test/ce#unmap2.sam : 5.5 KB
  163. htslib/htscodecs/tests/names/tok3/09.names.1 : 5.4 KB
  164. htslib/htscodecs/tests/names/tok3/05.names.1 : 5.4 KB
  165. htslib/htscodecs/tests/names/tok3/08.names.5 : 5.3 KB
  166. htslib/htscodecs/tests/names/tok3/08.names.3 : 5.3 KB
  167. htslib/test/test-bcf-sr.c : 5.2 KB
  168. htslib/htscodecs/tests/names/tok3/08.names.9 : 5.2 KB
  169. htslib/htscodecs/tests/names/tok3/08.names.7 : 5.2 KB
  170. htslib/test/auxf#values_java.cram : 5.2 KB
  171. htslib/test/plugins-dlhts.c : 5.1 KB
  172. htslib/test/test_realn.c : 5.1 KB
  173. htslib/htscodecs/tests/names/tok3/nv.names.5 : 5.0 KB
  174. htslib/htscodecs/tests/names/tok3/nv.names.3 : 5.0 KB
  175. htslib/htscodecs/tests/names/tok3/02.names.5 : 5.0 KB
  176. htslib/htscodecs/tests/names/tok3/02.names.3 : 5.0 KB
  177. htslib/test/fastqs_README.txt : 5.0 KB
  178. htslib/htscodecs/tests/names/tok3/nv.names.9 : 4.9 KB
  179. htslib/htscodecs/tests/names/tok3/nv.names.7 : 4.9 KB
  180. htslib/htscodecs/tests/names/tok3/02.names.7 : 4.9 KB
  181. htslib/htscodecs/tests/names/tok3/02.names.9 : 4.9 KB
  182. htslib/htscodecs/tests/names/tok3/09.names.11 : 4.9 KB
  183. htslib/htscodecs/tests/names/tok3/08.names.13 : 4.9 KB
  184. htslib/htscodecs/tests/names/tok3/08.names.15 : 4.9 KB
  185. htslib/htscodecs/tests/names/tok3/05.names.11 : 4.9 KB
  186. htslib/htscodecs/tests/names/tok3/10.names.5 : 4.8 KB
  187. htslib/htscodecs/tests/names/tok3/10.names.3 : 4.8 KB
  188. htslib/htscodecs/tests/names/tok3/nv.names.13 : 4.8 KB
  189. htslib/htscodecs/tests/names/tok3/08.names.19 : 4.8 KB
  190. htslib/htscodecs/tests/names/tok3/08.names.17 : 4.8 KB
  191. htslib/htscodecs/tests/names/tok3/02.names.13 : 4.8 KB
  192. htslib/htscodecs/tests/names/tok3/nv.names.15 : 4.8 KB
  193. htslib/htscodecs/tests/names/tok3/nv.names.19 : 4.8 KB
  194. htslib/htscodecs/tests/names/tok3/nv.names.17 : 4.8 KB
  195. htslib/htscodecs/tests/names/tok3/02.names.15 : 4.7 KB
  196. htslib/htscodecs/tests/names/tok3/10.names.7 : 4.7 KB
  197. htslib/htscodecs/tests/names/tok3/10.names.9 : 4.7 KB
  198. htslib/htscodecs/tests/names/tok3/02.names.19 : 4.7 KB
  199. htslib/htscodecs/tests/names/tok3/02.names.17 : 4.7 KB
  200. htslib/htscodecs/tests/names/tok3/10.names.13 : 4.6 KB
  201. htslib/htscodecs/tests/names/tok3/10.names.15 : 4.6 KB
  202. htslib/htscodecs/tests/names/tok3/10.names.19 : 4.5 KB
  203. htslib/htscodecs/tests/names/tok3/10.names.17 : 4.5 KB
  204. htslib/test/fastq/fastq.tst : 4.3 KB
  205. htslib/test/cross_validate.sh : 4.3 KB
  206. htslib/test/realn02.fa : 4.3 KB
  207. htslib/htscodecs/tests/Makefile.am : 4.2 KB
  208. htslib/test/fuzz/hts_open_fuzzer.c : 4.0 KB
  209. htslib/htscodecs/tests/rANS_static_fuzz.c : 4.0 KB
  210. htslib/htscodecs/tests/names/tok3/01.names.1 : 3.8 KB
  211. htslib/test/test-vcf-sweep.c : 3.8 KB
  212. htslib/htscodecs/tests/rANS_static4x16pr_fuzz.c : 3.8 KB
  213. htslib/test/realn02_exp.sam : 3.8 KB
  214. htslib/test/realn02_exp-e.sam : 3.8 KB
  215. htslib/test/realn02_exp-a.sam : 3.8 KB
  216. htslib/test/realn02-r.sam : 3.8 KB
  217. htslib/test/thrash_threads7.c : 3.7 KB
  218. htslib/test/test_kfunc.c : 3.6 KB
  219. htslib/htscodecs/tests/names/tok3/05.names.5 : 3.6 KB
  220. htslib/htscodecs/tests/names/tok3/05.names.3 : 3.6 KB
  221. htslib/htscodecs/tests/names/tok3/09.names.5 : 3.6 KB
  222. htslib/htscodecs/tests/names/tok3/09.names.3 : 3.6 KB
  223. htslib/htscodecs/tests/names/tok3/01.names.11 : 3.6 KB
  224. htslib/test/header_syms.pl : 3.6 KB
  225. htslib/htscodecs/tests/names/tok3/05.names.9 : 3.5 KB
  226. htslib/htscodecs/tests/names/tok3/05.names.7 : 3.5 KB
  227. htslib/test/range.out : 3.5 KB
  228. htslib/htscodecs/tests/names/tok3/09.names.9 : 3.5 KB
  229. htslib/htscodecs/tests/names/tok3/09.names.7 : 3.5 KB
  230. htslib/htscodecs/tests/names/tok3/09.names.15 : 3.4 KB
  231. htslib/htscodecs/tests/names/tok3/09.names.13 : 3.4 KB
  232. htslib/test/thrash_threads6.c : 3.4 KB
  233. htslib/htscodecs/tests/names/tok3/05.names.13 : 3.4 KB
  234. htslib/htscodecs/tests/names/tok3/05.names.15 : 3.4 KB
  235. htslib/htscodecs/tests/names/tok3/05.names.19 : 3.4 KB
  236. htslib/htscodecs/tests/names/tok3/05.names.17 : 3.4 KB
  237. htslib/htscodecs/tests/names/tok3/09.names.19 : 3.4 KB
  238. htslib/htscodecs/tests/names/tok3/09.names.17 : 3.4 KB
  239. htslib/test/mpileup/small.out : 3.3 KB
  240. htslib/test/test_introspection.c : 3.3 KB
  241. htslib/test/maintainer/check_copyright.pl : 3.3 KB
  242. htslib/htscodecs/tests/fqzcomp_qual_fuzz.c : 3.1 KB
  243. htslib/test/tabix/tabix.tst : 3.0 KB
  244. htslib/htscodecs/tests/tokenise_name3_fuzz.c : 3.0 KB
  245. htslib/htscodecs/tests/names/tok3/20.names.1 : 3.0 KB
  246. htslib/test/thread_pool.md : 2.9 KB
  247. htslib/htscodecs/tests/arith_dynamic_fuzz.c : 2.9 KB
  248. htslib/test/realn02.sam : 2.9 KB
  249. htslib/test/test_index.c : 2.9 KB
  250. htslib/test/fastq/inter_aux.sam : 2.8 KB
  251. htslib/test/ce#unmap1.sam : 2.7 KB
  252. htslib/test/maintainer/check_spaces.pl : 2.7 KB
  253. htslib/htscodecs/tests/names/tok3/20.names.11 : 2.7 KB
  254. htslib/test/tabix/vcf_file.bcf : 2.7 KB
  255. htslib/test/fastq/inter_casavaOX.sam : 2.7 KB
  256. htslib/test/fastq/inter_casava.sam : 2.7 KB
  257. htslib/test/fastq/interleaved.fq : 2.6 KB
  258. htslib/test/sam_filter/filter.tst : 2.6 KB
  259. htslib/test/test-logging.pl : 2.6 KB
  260. htslib/test/mpileup/mpileup.tst : 2.6 KB
  261. htslib/test/tabix/vcf_file.vcf : 2.5 KB
  262. htslib/test/fastq/interleaved_casava.fq : 2.5 KB
  263. htslib/test/fastq/inter_noaux.sam : 2.5 KB
  264. htslib/htscodecs/tests/names/tok3/01.names.3 : 2.5 KB
  265. htslib/test/fieldarith.c : 2.4 KB
  266. htslib/htscodecs/tests/names/tok3/01.names.13 : 2.4 KB
  267. htslib/test/mpileup/c1#pad3.sam : 2.4 KB
  268. htslib/htscodecs/tests/names/tok3/01.names.5 : 2.3 KB
  269. htslib/test/mpileup/c1#pad2.sam : 2.3 KB
  270. htslib/test/thrash_threads4.c : 2.3 KB
  271. htslib/htscodecs/tests/names/tok3/01.names.9 : 2.2 KB
  272. htslib/htscodecs/tests/names/tok3/01.names.7 : 2.2 KB
  273. htslib/test/thrash_threads5.c : 2.2 KB
  274. htslib/test/realn01_exp.sam : 2.2 KB
  275. htslib/test/realn01_exp-e.sam : 2.2 KB
  276. htslib/test/realn01_exp-a.sam : 2.2 KB
  277. htslib/test/mpileup/mp_N2.sam : 2.2 KB
  278. htslib/test/with-shlib.sh : 2.1 KB
  279. htslib/htscodecs/tests/names/tok3/01.names.15 : 2.1 KB
  280. htslib/test/test-vcf-api.out : 2.1 KB
  281. htslib/htscodecs/tests/names/tok3/01.names.17 : 2.1 KB
  282. htslib/htscodecs/tests/names/tok3/01.names.19 : 2.0 KB
  283. htslib/test/test-vcf-hdr-in.vcf : 2.0 KB
  284. htslib/test/mpileup/c1#pad1.sam : 2.0 KB
  285. htslib/test/no_hdr_sq_1.expected.sam : 2.0 KB
  286. htslib/test/mpileup/mp_ID.sam : 2.0 KB
  287. htslib/test/ce#5.sam : 1.9 KB
  288. htslib/test/tabix/bed_file.bed : 1.9 KB
  289. htslib/test/realn01.sam : 1.8 KB
  290. htslib/test/ce#5b.sam : 1.8 KB
  291. htslib/test/mpileup/mp_I.sam : 1.8 KB
  292. htslib/test/mpileup/mp_P.sam : 1.8 KB
  293. htslib/test/fastq/inter_aux-q.sam : 1.8 KB
  294. htslib/test/mpileup/mp_DI.sam : 1.7 KB
  295. htslib/test/mpileup/mp_N.sam : 1.7 KB
  296. htslib/test/thrash_threads3.c : 1.7 KB
  297. htslib/htscodecs/tests/names/tok3/nv2.names.1 : 1.7 KB
  298. htslib/htscodecs/tests/names/tok3/20.names.5 : 1.7 KB
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  300. htslib/test/no_hdr_sq_1.bam : 1.7 KB
  301. htslib/test/thrash_threads1.c : 1.7 KB
  302. htslib/test/fastq/inter_casavaOX-q.sam : 1.7 KB
  303. htslib/test/fastq/inter_casava-q.sam : 1.7 KB
  304. htslib/test/ce#tag_padded.sam : 1.6 KB
  305. htslib/test/ce#tag_depadded.sam : 1.6 KB
  306. htslib/htscodecs/tests/names/tok3/20.names.9 : 1.6 KB
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  310. htslib/test/thrash_threads2.c : 1.6 KB
  311. htslib/test/fastq/interleaved.fa : 1.6 KB
  312. htslib/htscodecs/tests/names/tok3/20.names.19 : 1.6 KB
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  314. htslib/test/mpileup/mp_D.sam : 1.5 KB
  315. htslib/test/fastq/inter_noaux-q.sam : 1.5 KB
  316. htslib/test/fastq/interleaved_casava.fa : 1.5 KB
  317. htslib/test/fastq/r1.sam : 1.4 KB
  318. htslib/htscodecs/tests/names/tok3/nv2.names.11 : 1.4 KB
  319. htslib/test/fastq/r1.fq : 1.4 KB
  320. htslib/test/test-vcf-hdr.out : 1.3 KB
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  324. htslib/test/fastq/r2.sam : 1.3 KB
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  327. htslib/test/mpileup/small.bam : 1.3 KB
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  329. htslib/test/fastq/single_noaux.sam : 1.2 KB
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  337. htslib/test/xx#tlen.sam : 1.0 KB
  338. htslib/test/md#1.sam : 1.0 KB
  339. htslib/test/fastq/filter_casava.fq : 1.0 KB
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  341. htslib/test/fieldarith.sam : 910 B
  342. htslib/htscodecs/tests/names/tok3/nv2.names.5 : 903 B
  343. htslib/htscodecs/tests/names/tok3/nv2.names.3 : 903 B
  344. htslib/test/fastq/r1.fa : 870 B
  345. htslib/test/test-bcf-translate.out : 869 B
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  347. htslib/htscodecs/tests/arith.test : 856 B
  348. htslib/test/c2#pad.sam : 847 B
  349. htslib/htscodecs/tests/names/tok3/nv2.names.9 : 846 B
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  354. htslib/htscodecs/tests/names/tok3/nv2.names.15 : 809 B
  355. htslib/test/fastq/single_aux-q.sam : 805 B
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  364. htslib/htscodecs/tests/rans4x8.test : 742 B
  365. htslib/test/fastq/r2.fa : 730 B
  366. htslib/test/fastq/single.fa : 720 B
  367. htslib/test/realn01.fa : 719 B
  368. htslib/test/fastq/filter_casava-q.sam : 667 B
  369. htslib/htscodecs/tests/tok3.test : 667 B
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  371. htslib/test/xx#large_aux2.sam : 651 B
  372. htslib/test/ce#2.sam : 645 B
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  374. htslib/test/bcf-sr/merge.noidx.b.vcf : 634 B
  375. htslib/test/tabix/large_chr.vcf : 622 B
  376. htslib/test/fastq/filter_casava.fa : 596 B
  377. htslib/test/longrefs/index.expected1.vcf : 594 B
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  379. htslib/test/c1#pad2.sam : 527 B
  380. htslib/test/bcf-sr/merge.noidx.rec_order.vcf : 518 B
  381. htslib/test/bcf-sr/merge.noidx.hdr_order.vcf : 518 B
  382. htslib/test/bcf-sr/merge.noidx.a.vcf : 518 B
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  385. htslib/test/sam_filter/string1.out : 485 B
  386. htslib/test/sam_filter/string2.out : 451 B
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  388. htslib/test/c1#unknown.sam : 429 B
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  390. htslib/test/colons.bam.bai : 424 B
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  392. htslib/test/tabix/bed_file.separate.out : 407 B
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  396. htslib/test/mpileup/c1#pad2.out : 355 B
  397. htslib/test/ce#1.sam : 341 B
  398. htslib/test/c1#clip.sam : 337 B
  399. htslib/test/noroundtrip-out.vcf : 325 B
  400. htslib/test/xx#unsorted.sam : 320 B
  401. htslib/test/sam_filter/string6.out : 319 B
  402. wrapper.c : 305 B
  403. htslib/test/xx#pair.sam : 304 B
  404. htslib/test/xx#repeated.sam : 298 B
  405. htslib/test/faidx.fa : 289 B
  406. htslib/test/tabix/large_chr.20.1.2147483647.out : 288 B
  407. htslib/test/mpileup/mp_N2.out : 275 B
  408. htslib/test/mpileup/c1#pad1.out : 274 B
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  410. htslib/test/colons.bam : 268 B
  411. htslib/test/xx#triplet.sam : 267 B
  412. htslib/test/xx#minimal.sam : 254 B
  413. htslib/test/formatcols.vcf : 241 B
  414. htslib/test/ce.fa.fai : 230 B
  415. htslib/test/formatmissing.vcf : 226 B
  416. htslib/test/formatmissing-out.vcf : 226 B
  417. htslib/test/index.vcf.gz.tbi : 213 B
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  419. htslib/test/mpileup/mp_DI.out : 197 B
  420. htslib/test/fastq/multiline.fq : 188 B
  421. htslib/test/mpileup/mp_ID.out : 181 B
  422. htslib/test/bgziptest.txt.gz : 181 B
  423. htslib/test/mpileup/mp_P.out : 169 B
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  428. htslib/test/mpileup/c1#pad3.out : 134 B
  429. htslib/test/mpileup/mp_D.out : 130 B
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  431. htslib/test/index.bam.csi : 130 B
  432. htslib/test/bcf-sr/merge.noidx.abc.expected.out : 128 B
  433. htslib/test/fastq/multiline-q.sam : 126 B
  434. htslib/test/mpileup/mp_N.out : 122 B
  435. htslib/test/tabix.out : 98 B
  436. htslib/test/fastq/multiline.fa : 98 B
  437. htslib/test/range.cram.crai : 94 B
  438. htslib/test/no_hdr_sq_1.bam.csi : 94 B
  439. htslib/test/test-vcf-sweep.out : 92 B
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  441. htslib/test/xx.fa : 86 B
  442. htslib/test/longrefs/index.expected2.vcf : 83 B
  443. htslib/test/index.cram.crai : 83 B
  444. htslib/test/tabix/vcf_file.2.3199812.out : 74 B
  445. htslib/test/xx#blank.sam : 71 B
  446. htslib/test/tabix/vcf_file.1.3000151.out : 67 B
  447. htslib/test/tabix/bed_file.Y.100200.out : 47 B
  448. htslib/test/md.fa : 45 B
  449. htslib/test/xx.fa.fai : 44 B
  450. htslib/test/auxf.fa : 29 B
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  452. htslib/test/fastq/minimal-q.sam : 22 B
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  454. htslib/test/auxf.fa.fai : 18 B
  455. htslib/test/realn02.fa.fai : 17 B
  456. htslib/test/c1.fa : 15 B
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  460. htslib/test/md.fa.fai : 13 B
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  462. htslib/test/fastq/minimal.fq : 9 B
  463. htslib/test/fastq/minimal.fa : 5 B
  464. htslib/test/sam_filter/func4.out : 4 B
  465. htslib/test/sam_filter/int3.out : 3 B
  466. htslib/test/sam_filter/int2.out : 3 B
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  469. htslib/test/sam_filter/func3.out : 2 B
  470. htslib/test/sam_filter/func1.out : 2 B
  471. htslib/test/emptyfile : 0 B